Shopify × QuickBooks Online

Your Shopify payouts,
perfectly in the books.

PaydayBooks automatically syncs every Shopify Payments payout to QuickBooks Online as a proper SalesReceipt, RefundReceipt, and Deposit — so your books reconcile without lifting a finger.

Install Free on Shopify

Free 14-day trial · No credit card required

Shopify pays you every few days.
QuickBooks has no idea what happened.

Each payout bundles gross sales, refunds, disputes, fees, and adjustments into a single net number. Manually reconciling that mess every pay cycle wastes hours and invites mistakes — especially at month-end and tax time.

How it works

1

Connect your store

Install PaydayBooks from the Shopify App Store and link your QuickBooks Online account in two clicks.

2

Map your accounts

Tell PaydayBooks which QuickBooks accounts to use for sales, refunds, fees, and your bank — takes about 60 seconds.

3

Preview before posting

Run a dry-run on your most recent payout. See exactly what will be posted to QuickBooks before anything is written.

4

Sync automatically

PaydayBooks picks up every new payout every 6 hours. Three perfectly structured entries, zero effort.

Built for Shopify merchants who care about clean books

Proper double-entry accounting

Every payout creates a SalesReceipt, RefundReceipt, and Deposit — exactly the three entries a bookkeeper or CPA expects to see. No workarounds, no shortcuts.

Reconcile in minutes, not hours

Each QBO entry is tagged with the payout ID so you can trace any number back to the exact Shopify payout in seconds.

Handles the messy edge cases

Refunds, chargebacks, Shopify fees, and partial payouts are all decomposed correctly — so your P&L stays clean no matter what Shopify throws at it.

Retry logic built in

If a sync fails due to a temporary QBO outage, PaydayBooks retries automatically with exponential backoff and notifies you only when something needs your attention.

"Finally, my Shopify payouts show up in QuickBooks exactly the way my accountant wants them — sales, refunds, and the bank deposit all in one shot."

— Early access merchant

Stop reconciling Shopify payouts by hand.

Install PaydayBooks and have your first payout synced to QuickBooks in under 5 minutes.

Get Started Free

14-day free trial · Cancel any time

Need help? Email us at [email protected]